PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN37261.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 120aa    MW: 13844.4 Da    PI: 9.7396
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN37261.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.84.5e-095499655
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                +++Er+RR ri  ++ +L++l+ +     +k    a++L +Av++Ik Lq
  KHN37261.1 54 SIAERQRRTRISGKLKKLQDLVSNM----DKQTCYADMLDLAVQHIKGLQ 99
                689*********************7....577999**************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.7734898IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.95E-1451113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.88E-852103No hitNo description
Gene3DG3DSA:4.10.280.102.6E-1253112IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.7E-954104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-65499IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
MYLLDWTLLP PCILLRCLKA LESQFSLEKL LHIPRDSVPC KIRAKRGCAT HPRSIAERQR  60
RTRISGKLKK LQDLVSNMDK QTCYADMLDL AVQHIKGLQT QLQNLHRELE NCTCGCKQSK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007142611.12e-60hypothetical protein PHAVU_007G002200g
RefseqXP_014513572.13e-60PREDICTED: transcription factor bHLH128-like
SwissprotQ8H1022e-52BH128_ARATH; Transcription factor bHLH128
TrEMBLA0A0B2RSA08e-84A0A0B2RSA0_GLYSO; Transcription factor bHLH128
STRINGGLYMA20G39220.13e-59(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF76803140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.11e-53bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]